Lab Informatics Scientist – ELN Design/Development - Lilly Medicine Foundry
Eli Lilly and Company, Indianapolis, IN, United States
Organization and Position Overview
Lilly recently announced a $4.5 billion investment to create the Lilly Medicine Foundry, a new center for advanced manufacturing and drug development. The first‑ever facility of its kind combines research and manufacturing in a single location, allowing Lilly to further develop innovative solutions to optimize manufacturing processes, increase capacity for clinical‑trial medicines, reduce costs, and lower environmental impact.
During the Project Delivery Phase and Startup Phase of the project (2025 to 2028), roles will be fluid and dynamic as the project moves from design, to start‑up, to steady‑state operations. Team members will support project delivery, build a new organization, and develop and implement the necessary systems and business processes required to support GMP operations.
The Laboratory Informatics Scientist is a technical‑track position focused on electronic laboratory notebook (ELN) development and template design. The role will build and support the digital ecosystem powering Lilly Medicine Foundry laboratories, with a primary focus on designing and deploying structured ELN templates across multiple platforms including LabVantage ELN, Signals, and Benchling. The position will help configure, maintain, and audit critical laboratory informatics platforms, including ELN/LES, LIMS, MODA, Empower, and other systems that enable efficient, compliant scientific operations.
Responsibilities
Configure, deploy, and support laboratory informatics platforms, with primary ownership of ELN systems (LabVantage ELN, Signals, Benchling) and cross‑trained backup support for LIMS, MODA, LES, and Empower.
Design, develop, and maintain structured ELN templates, notebook forms, and review/approval workflows that work harmoniously across multiple ELN platforms.
Participate in system installation, qualification, validation activities, and periodic reviews to maintain a validated state.
Troubleshoot system issues and serve as a primary technical point of contact (SME) for lab users.
Monitor the performance of laboratory informatics systems to ensure data integrity, compliance, and efficiency.
Drive enhancements to ELN templates, digital workflows, automation opportunities, and end‑user experience.
Support continuous improvement initiatives aligned with quality systems and laboratory operations.
Maintain compliance with cGMP/GLP and data integrity expectations across laboratory systems.
Prepare and author quality system deliverables, including management review summaries, deviations, CAPAs, and system documentation.
Support internal and external audit readiness and represent laboratory systems during inspections.
Develop training materials and deliver user training for new systems, functionality, or processes.
Partner closely with scientists and IT teams to align system functionality with lab needs.
Contribute to project planning, timelines, and resource recommendations for lab informatics initiatives.
Model an inclusive, collaborative mindset that encourages diverse perspectives and creative problem‑solving.
Basic Requirements
B.S. in Computer Science, Information Systems, Chemistry, Biology, Engineering, or related discipline with 3+ years of experience, OR H.S./Associates degree with 5+ years of experience supporting or administering laboratory informatics systems (ELN, LIMS, LES, QC systems, or similar). Preference for hands‑on ELN template development or configuration experience in a regulated environment (GxP, GLP, GMP).
Hands‑on experience with computerized system validation (CSV) concepts and data integrity requirements.
Experience configuring systems, populating master data, or supporting system deployment/upgrade activities.
Qualified candidates must be legally authorized to be employed in the United States. Lilly does not anticipate providing sponsorship for employment visa status (e.g., H‑1B or TN status) for this employment position.
Additional Preferences
Familiarity with end‑to‑end analytical workflows in a QC or development lab.
Proficiency with computer systems including Microsoft Office products, LIMS, Laboratory Execution Systems, chromatography systems, electronic laboratory notebook systems (e.g., Signals, Benchling, LabVantage ELN) including template development and implementation of systems.
Demonstrated ability to drive and accept change.
Good interpersonal skills and a sustained tendency for collaboration.
Demonstrated success in persuasion, influence, and negotiation.
Ability to prioritize multiple activities and manage ambiguity.
Must possess strong communication (oral, written), organizational, and leadership skills.
Other Information
Initial location at Lilly Technology Center, Indianapolis.
Permanent location at the new Lilly Medicine Foundry in Lebanon, Indiana.
Flexibility to work from Indianapolis (or other Lilly sites) may be required throughout 2026 and 2027.
Position requires on‑site presence, 8‑hour days, five days per week, with flexibility to support activities during shutdowns, weekends, etc.
0‑10% travel required.
Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance.
Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.
Actual compensation will depend on a candidate’s education, experience, skills, and geographic location. The anticipated wage for this position is $65,250 - $169,400.
Full‑time equivalent employees will also be eligible for a company bonus (depending, in part, on company and individual performance). Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company‑sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time‑off and leave of absence benefits; and well‑being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities). Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.
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Lilly recently announced a $4.5 billion investment to create the Lilly Medicine Foundry, a new center for advanced manufacturing and drug development. The first‑ever facility of its kind combines research and manufacturing in a single location, allowing Lilly to further develop innovative solutions to optimize manufacturing processes, increase capacity for clinical‑trial medicines, reduce costs, and lower environmental impact.
During the Project Delivery Phase and Startup Phase of the project (2025 to 2028), roles will be fluid and dynamic as the project moves from design, to start‑up, to steady‑state operations. Team members will support project delivery, build a new organization, and develop and implement the necessary systems and business processes required to support GMP operations.
The Laboratory Informatics Scientist is a technical‑track position focused on electronic laboratory notebook (ELN) development and template design. The role will build and support the digital ecosystem powering Lilly Medicine Foundry laboratories, with a primary focus on designing and deploying structured ELN templates across multiple platforms including LabVantage ELN, Signals, and Benchling. The position will help configure, maintain, and audit critical laboratory informatics platforms, including ELN/LES, LIMS, MODA, Empower, and other systems that enable efficient, compliant scientific operations.
Responsibilities
Configure, deploy, and support laboratory informatics platforms, with primary ownership of ELN systems (LabVantage ELN, Signals, Benchling) and cross‑trained backup support for LIMS, MODA, LES, and Empower.
Design, develop, and maintain structured ELN templates, notebook forms, and review/approval workflows that work harmoniously across multiple ELN platforms.
Participate in system installation, qualification, validation activities, and periodic reviews to maintain a validated state.
Troubleshoot system issues and serve as a primary technical point of contact (SME) for lab users.
Monitor the performance of laboratory informatics systems to ensure data integrity, compliance, and efficiency.
Drive enhancements to ELN templates, digital workflows, automation opportunities, and end‑user experience.
Support continuous improvement initiatives aligned with quality systems and laboratory operations.
Maintain compliance with cGMP/GLP and data integrity expectations across laboratory systems.
Prepare and author quality system deliverables, including management review summaries, deviations, CAPAs, and system documentation.
Support internal and external audit readiness and represent laboratory systems during inspections.
Develop training materials and deliver user training for new systems, functionality, or processes.
Partner closely with scientists and IT teams to align system functionality with lab needs.
Contribute to project planning, timelines, and resource recommendations for lab informatics initiatives.
Model an inclusive, collaborative mindset that encourages diverse perspectives and creative problem‑solving.
Basic Requirements
B.S. in Computer Science, Information Systems, Chemistry, Biology, Engineering, or related discipline with 3+ years of experience, OR H.S./Associates degree with 5+ years of experience supporting or administering laboratory informatics systems (ELN, LIMS, LES, QC systems, or similar). Preference for hands‑on ELN template development or configuration experience in a regulated environment (GxP, GLP, GMP).
Hands‑on experience with computerized system validation (CSV) concepts and data integrity requirements.
Experience configuring systems, populating master data, or supporting system deployment/upgrade activities.
Qualified candidates must be legally authorized to be employed in the United States. Lilly does not anticipate providing sponsorship for employment visa status (e.g., H‑1B or TN status) for this employment position.
Additional Preferences
Familiarity with end‑to‑end analytical workflows in a QC or development lab.
Proficiency with computer systems including Microsoft Office products, LIMS, Laboratory Execution Systems, chromatography systems, electronic laboratory notebook systems (e.g., Signals, Benchling, LabVantage ELN) including template development and implementation of systems.
Demonstrated ability to drive and accept change.
Good interpersonal skills and a sustained tendency for collaboration.
Demonstrated success in persuasion, influence, and negotiation.
Ability to prioritize multiple activities and manage ambiguity.
Must possess strong communication (oral, written), organizational, and leadership skills.
Other Information
Initial location at Lilly Technology Center, Indianapolis.
Permanent location at the new Lilly Medicine Foundry in Lebanon, Indiana.
Flexibility to work from Indianapolis (or other Lilly sites) may be required throughout 2026 and 2027.
Position requires on‑site presence, 8‑hour days, five days per week, with flexibility to support activities during shutdowns, weekends, etc.
0‑10% travel required.
Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance.
Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.
Actual compensation will depend on a candidate’s education, experience, skills, and geographic location. The anticipated wage for this position is $65,250 - $169,400.
Full‑time equivalent employees will also be eligible for a company bonus (depending, in part, on company and individual performance). Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company‑sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time‑off and leave of absence benefits; and well‑being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities). Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.
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